Fig. 4From: In situ isolation of nuclei or nuclear proteins from adherent cells: a simple, effective method with less cytoplasmic contaminationFluorescence confocal imaging visualizes the effects of the in situ isolation of nuclear proteins from adherent nuclei on the cytoplasmic and intranuclear contents of HUVEC cells. a Dynamic observation of the morphological and fluorescence changes of cells after successive Triton X-100 (0.1%) and SDS (0.1%) treatments as indicated by the black arrows. Upper panels: DIC images (the imaging focus is on cell morphology); lower panels: images merged from DIC and fluorescence images (the imaging focus is on fluorescence). The cytoplasmic contents were stained with a red fluorescent dye (SQ-2) and the intranuclear chromosomes were stained with Hoechst33342 (blue). b Depleting effect of 0.1% Triton X-100 for 10 min on tubulin cytoskeleton. Left panels: images merged from DIC and fluorescence images (tubulin cytoskeleton in green and the nuclei in blue); right panels: DIC images. c, d No effects of 0.1% Triton X-100 on intranuclear contents including chromosomes and proteins (e.g., pP65 in c and Hif-1α in d as representatives). The HUVEC cells have been activated by 1 μg/mL LPS prior to Triton treatment. The chromosomes were stained with DAPI (blue), pP65 was stained with anti-pP65 antibody and AlexaFluor647-conjugated anti-IgG antibody (red), and Hif-1α was stained with anti-Hif-1α mAb and FITC-conjugated goat anti-mouse IgG. Scale bars: 20 μm (a–d). Additional file 2: Video S1 also shows the time-lapse observation of the effects of successive Triton X-100 and SDS treatments on the mitochondria and nuclei of cells fluorescently stained with Mitotracker (red) and Hoechst33342 (blue)Back to article page