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Table 2 Distribution of copy number deleti ons on chromosomes

From: Integrated analyses of copy number variations and gene differential expression in lung squamous-cell carcinoma

Chr Deletions only
Observed CNV in cases and controls Ratio of case/control p values Observed CNV in cases and controls Ratio of case/control p values Observed CNV in cases and controls Ratio of case/control p values
1–10 kb 10–50 kb >50 kb
1 1709 2.49539 0.8626 384 6.08127 0.3246 170 3.72008 0.2772
2 1642 3.13118 1.00E−04 509 6.81826 0.0332 237 1.80857 0.0413
3 1611 3.01258 0.7392 500 7.48133 0.9189 266 2.15987 0.8298
4 1904 2.77845 0.8719 520 7.42289 0.9481 251 1.86097 0.3325
5 1483 2.52167 0.0617 543 5.93514 0.0453 249 2.01002 0.6479
6 1440 2.82868 0.2306 362 6.5556 0.0581 118 3.96903 0.5206
7 1248 3.57254 0.7114 368 8.09861 0.6195 113 2.40595 0.8872
8 1388 2.79406 0.0007 371 7.95181 0.882 306 2.41128 0.4959
9 1195 2.66351 1.00E−04 391 7.41424 0.0011 495 1.69698 0.7884
10 1107 2.5371 0.2834 269 4.27999 0.5673 208 2.3065 0.0204
11 1183 2.28072 0.0046 282 6.60225 0.0169 138 2.7495 0.0148
12 893 2.49211 0.0323 152 6.80094 0.0364 35 2.42966 0.0054
13 932 2.23366 0.3331 272 4.2262 0.0271 94 1.51505 0.5151
14 741 2.25316 0.0106 221 8.66705 0.2036 118 2.3046 0.6436
15 623 2.4265 0.06 157 6.87918 0.0042 139 6.42084 0.0004
16 647 2.54643 0.5412 216 6.04562 0.0075 122 3.28046 0.1362
17 594 2.33232 0.2435 121 3.90574 0.3034 72 3.95823 0.0278
18 698 2.30858 0.9919 135 10.792 0.7888 74 1.79206 0.2417
19 405 2.39362 0.9983 121 3.42131 0.9996 44 2.54418 0.7119
20 427 1.88614 0.0405 78 5.83578 0.4637 24 3.52891 0.1368
21 345 1.94557 0.4154 85 4.8969 0.0999 82 1.77643 0.025
22 319 2.5579 0.0145 81 6.01787 0.0148 44 4.84881 0.0547