From: 50 years of amino acid hydrophobicity scales: revisiting the capacity for peptide classification
Sequence pool | Peptide | FO in pool | Average FO in remaining set | Average FO in remaining set GBSS |
---|---|---|---|---|
dc-helix | ALAA | 0.0005088 | 0.0001336 | 0.0001327 |
AALA | 0.0004970 | 0.0001545 | 0.0001559 | |
ALLE | 0.0003787 | 6.55e−05 | 6.82e−05 | |
dc-random | GSSG | 0.0028090 | 0.0002055 | 0.0001760 |
SSGS | 0.0015990 | 0.0001405 | 0.0001205 | |
SGSS | 0.0014350 | 0.0001022 | 7.90e−05 | |
HHHH | 0.0007792 | 4.17e−05 | 2.41e−05 | |
EEEE | 0.0003691 | 2.28e−05 | 1.88e−05 | |
dc-sheet | VLLV | 0.0003481 | 0.0001082 | 0.0001198 |
dd-helix | EELL* | 0.0003622 | 5.37e−05 | 5.67e−05 |
LEEL* | 0.0003372 | 6.47e−05 | 6.58e−05 | |
dd-random | GSSG | 0.0006914 | 0.0003379 | 0.0003685 |
SSGS | 0.0003872 | 0.0002163 | 0.0002307 | |
SGSS | 0.0003042 | 0.0001729 | 0.0001818 | |
SSGL | 0.0002489 | 4.35e−05 | 4.62e−05 | |
dd-sheet | GEVV* | 0.0002647 | 4.57e−05 | 4.93e−05 |
PDGT* | 0.0002427 | 1.19e−05 | 1.53e−05 | |
DGSV* | 0.0002427 | 2.88e−05 | 3.05e−05 | |
no-helix | SGSS | 0.0001950 | 0.0001797 | 0.0001918 |
PDGS | 0.0001509 | 2.59e−05 | 3.24e−05 | |
no-random | VVGI | 0.0017010 | 4.14e−05 | 3.84e−05 |
QELD | 0.0010210 | 1.13e−05 | 1.45e−05 | |
no-sheet | LEAL | 0.0003080 | 8.56e−05 | 9.38e−05 |
random | GSSG* | 0.0012510 | 0.0003029 | 2.53e−05 |
GPSS | 0.0007403 | 0.0001942 | 4.57e−05 | |
SGPS | 0.0006586 | 0.0001508 | 2.70e−05 | |
SSGS | 0.0005360 | 1.43e−05 | 6.00e−07 | |
SGSS | 0.0005156 | 1.14e−05 | 3.60e−06 | |
s-sheet | VKVI | 0.0001704 | 2.9e−06 | 1.16e−05 |
krtm-helix | LGLL | 0.0012460 | 6.78e−05 | 5.58e−05 |
VLLV | 0.0009341 | 7.16e−05 | 6.66e−05 | |
GIAL | 0.0009341 | 5.29e−05 | 4.11e−05 | |
tm-helix | LLLL | 0.0004439 | 7.87e−05 | 4.07e−05 |
LILL | 0.0004040 | 3.21e−05 | 1.25e−05 | |
LLLV | 0.0003990 | 4.38e−05 | 2.15e−05 | |
ILLL | 0.0003891 | 2.98e−05 | 1.73e−05 | |
krtm-sheet | SIGA | 0.0012020 | 2.92e−05 | 1.69e−05 |
tm-sheet | SGPL | 0.0004559 | 1.88e−05 | 1.20e−05 |
SLNL | 0.0004079 | 1.96e−05 | 2.15e−05 | |
LYGG | 0.0004079 | 1.06e−05 | 9.80e−06 |