Molecular cloning and subcellular localization of six HDACs and their roles in response to salt and drought stress in kenaf (Hibiscus cannabinus L.)

Table 1 Histone deacetylases identified in kenaf

HDAC families	Gene name	Accession number^a	ORF length (bp)^b	Protein length^c	MW (kDa)	pI	GRAVY	Number of exons	Localization^d
RPD3/HDA1	HcHDA2	MH732953	1080	359	39.90	8.51	− 0.157	13	Nucleus
	HcHDA6	MH732954	1413	470	52.68	5.29	− 0.507	6	Nucleus
	HcHDA8	MH732955	1143	380	41.04	5.30	− 0.121	3	Nucleus
	HcHDA9	MH732958	1290	429	49.09	5.05	− 0.399	14	Nucleus, cytosol
	HcHDA19	MH732956	1428	475	53.35	5.45	− 0.436	7	Nucleus, cytosol
Sirtuin	HcSRT2	MH732957	1158	385	42.83	9.43	− 0.262	11	Chloroplast

MW, molecular weight; pI, isoelectric point; GRAVY, grand average of hydropathicity
^aAccession numbers of full-length protein sequence available at NCBI (http://www.ncbi.nlm.nih.gov/)
^bLength of open reading frame (number of base pair)
^cLength of protein (number of amino acid)
^dSubcellular Localization of kenaf histone deacetylases supported by Plant-mPLoc (http://www.csbio.sjtu.edu.cn/bioinf/plant-multi/)

ISSN: 0717-6287