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Table 1 The data of Illumina transcriptome reads mapped to the reference genome (≤ 3 bp mismatch)

From: Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)

Reads mapping Reads number (%)
LCK LLP RCK RLP
Total reads 46,784,432 48,816,718 43,588,908 46,760,112
Total BasePairs 4,678,443,200 4,881,671,800 4,358,890,800 4,676,011,200
Total mapped reads 34,881,473 (74.56) 36,708,638 (75.20) 31,979,139 (73.37) 34,819,568 (74.46)
Perfect match 25,627,140 (54.78) 26,844,106 (54.99) 23,267,595 (53.38) 25,316,122 (54.14)
≤ 3 bp mismatch 9,254,333 (19.78) 9,864,532 (20.21) 8,711,544 (19.99) 9,503,446 (20.32)
Unique match 34,230,815 (73.17) 35,986,019 (73.72) 31,136,589 (71.43) 34,001,830 (72.72)
Multi-position match 650,658 (1.39) 722,619 (1.48) 842,550 (1.93) 817,738 (1.75)
Total unmapped reads 11,902,959 (25.44) 12,108,080 (24.80) 11,609,769 (26.63) 11,940,544 (25.54)
  1. LLP leaves under low phosphorus stress treatment, RLP roots under low phosphorus stress treatment, LCK leaves under phosphorus sufficiency stress treatment, RCK roots under phosphorus sufficiency stress treatment. (The same as below.)
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