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Table 8 Periodicities found in the first significant pair in the 19 initial separations among bacteria of the Firmicutes group

From: Selective intra-dinucleotide interactions and periodicities of bases separated by K sites: a new vision and tool for phylogeny analyses

S

B. thur

B. cer

B. ant

B. wei

B. cyto

B. subt

B. atro

B. sele

Sta. au

La. ca

Clo. bo

My. ho

0

TA−

TA−

TA−

TA−

TA−

TA−

TA−

TA−

TA−

TA−

CG−

TA−

1

GC−

GC−

GC−

GC−

GC−

CG+

CG+

CG+

GT+

CC−

TA−

CC−

2

CC+

CC+

CC+

CC+

CC+

AT−

AT−

AT−

GG+

GC−

CC+

GG+

3

CG−

CG−

CG−

CG−

CG−

AT−

AT−

TA−

CG−

TA−

CG−

GC+

4

GC−

GC−

GC−

GC−

GC−

AT−

AT−

AT−

GC−

AC+

GC−

CG+

5

CC+

CC+

CC+

CC+

CC+

GG+

GG+

GG+

CC+

CC+

CC+

CC+

6

CG−

CG−

CG−

CG−

CG−

CG−

CG−

AC+

CG−

AA−

CG−

GC+

7

GC−

GC−

GC−

GC−

GC−

AT−

AT−

AT−

GC−

AT−

GC−

CG+

8

CC+

CC+

CC+

CC+

CC+

GG+

GG+

GG+

CC+

CC+

CC+

GG+

9

CG−

CG−

CG−

CG−

CG−

TA−

TA−

TA−

CG−

CA+

CG−

GC+

10

GC−

GC−

GC−

GC−

GC−

AT−

AT−

AT−

GC−

AC+

GC−

CG+

11

CC+

CC+

CC+

CC+

CC+

GG+

GG+

GG+

GG+

CC+

CC+

GG+

12

CG−

CG−

CG−

GC+

CG−

TA−

CG+

CG+

GC+

AT+

CG−

GC+

13

GC−

GC−

GC−

GC−

GC−

CG+

CG+

TA+

CG+

TA+

GC−

CG+

14

GG+

CC+

CC+

CC+

CC+

GG+

GG+

GG+

GG+

CC+

CC+

GG+

15

CG−

CG−

CG−

CG−

CG−

CG+

CG+

GA+

CG−

AT+

CG−

GC+

16

GC−

GC−

GC−

GC−

GC−

GC+

GC+

AT−

GC−

TA+

GC−

CG+

17

CC+

CC+

CC+

CC+

CC+

GG+

GG+

GG+

CC+

CC+

CC+

GG+

18

CG−

CG−

CG−

CG−

CG−

TA−

TA−

AT+

CG−

AT+

CG−

GC+

  1. Bacterial strains of the Firmicutes group. Bacillus: thuringiensis, cereus, anthracis, weihenstephanensis, cytotoxicus, subtilis, atrophaeus, selenitireducens. Staphylococcus aureus; Lactobacillus casei; Clostridium botulinum; Mycoplasma hominis. Separation (S) from 0 to 18 nucleotide sites