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Table 1 Overview of sequencing data

From: Improved assembly procedure of viral RNA genomes amplified with Phi29 polymerase from new generation sequencing data

  Middelburg ArTB 5290 Mengovirus AnrB 3741 Mengovirus ArB 19017
Total number of reads 11,875,121 11,925,315 12,708,896
Mean read length (bp) 101 101 101
Mus musculus reads removal by mapping 4,951,166 (41.69 %) 5,207,943 (43.67 %) 4,218,708 (33.35 %)
Trimmed reads (after host removal) 6,549,596 (58.31 %) 6,372,036 (53.43 %) 8,097,092 (63.71 %)
Mean trimmed read length (bp) 93.75 90.49 87.13
Mean Phred score 36 36 36
Total number of viral reads 357,760 (5.46 %) 136,903 (2.1 %) 495,356 (6.1 %)