| NC | HS | CS | |||
---|---|---|---|---|---|---|
Number of genes | Percent | Number of genes | Percent | Number of genes | Percent | |
Clean tag | 38381 | Â | 38381 | Â | 38381 | Â |
Perfect match (sense) | ||||||
 1 tag → 1 gene | 8629 | 22.48 | 9943 | 25.91 | 9089 | 23.68 |
 1 tag → n gene | 190 | 0.50 | 217 | 0.57 | 219 | 0.57 |
1Â bp MisMatch (sense) | ||||||
 1 tag → 1 gene | 1219 | 3.18 | 1358 | 3.54 | 1151 | 3.00 |
 1 tag → n gene | 96 | 0.25 | 101 | 0.26 | 97 | 0.25 |
Perfect match (antisense) | ||||||
 1 tag → 1 gene | 5122 | 13.35 | 5311 | 13.84 | 4965 | 12.94 |
 1 tag → n gene | 76 | 0.20 | 74 | 0.19 | 66 | 0.17 |
1Â bp MisMatch (antisense) | ||||||
 1 tag → 1 gene | 567 | 1.48 | 575 | 1.50 | 490 | 1.28 |
 1 tag → n gene | 26 | 0.07 | 26 | 0.07 | 12 | 0.03 |
All tag mapping to sense gene | 8983 | 23.40 | 10304 | 26.85 | 9464 | 24.66 |
Unambiguous tag mapping to sense gene | 8836 | 23.02 | 10145 | 26.43 | 9295 | 24.22 |
All tag mapping to antisense gene | 5331 | 13.89 | 5519 | 14.38 | 5157 | 13.44 |
Unambiguous tag mapping to antisense gene | 5285 | 13.77 | 5468 | 14.25 | 5116 | 13.33 |
All tag mapping to gene (sense and antisenese) | 10156 | 26.46 | 11420 | 29.75 | 10600 | 27.62 |
Unambiguous tag mapping to gene (sense and antisense) | 10016 | 26.10 | 11259 | 29.33 | 10441 | 27.20 |