Skip to main content

Table 2 Statistics of distinct tag mapping to gene (sense and antisense)

From: Transcriptome responses to heat- and cold-stress in ladybirds (Cryptolaemus montrouzieri Mulasnt) analyzed by deep-sequencing

  NC HS CS
Number of genes Percent Number of genes Percent Number of genes Percent
Clean tag 38381   38381   38381  
Perfect match (sense)
 1 tag → 1 gene 8629 22.48 9943 25.91 9089 23.68
 1 tag → n gene 190 0.50 217 0.57 219 0.57
1 bp MisMatch (sense)
 1 tag → 1 gene 1219 3.18 1358 3.54 1151 3.00
 1 tag → n gene 96 0.25 101 0.26 97 0.25
Perfect match (antisense)
 1 tag → 1 gene 5122 13.35 5311 13.84 4965 12.94
 1 tag → n gene 76 0.20 74 0.19 66 0.17
1 bp MisMatch (antisense)
 1 tag → 1 gene 567 1.48 575 1.50 490 1.28
 1 tag → n gene 26 0.07 26 0.07 12 0.03
All tag mapping to sense gene 8983 23.40 10304 26.85 9464 24.66
Unambiguous tag mapping to sense gene 8836 23.02 10145 26.43 9295 24.22
All tag mapping to antisense gene 5331 13.89 5519 14.38 5157 13.44
Unambiguous tag mapping to antisense gene 5285 13.77 5468 14.25 5116 13.33
All tag mapping to gene (sense and antisenese) 10156 26.46 11420 29.75 10600 27.62
Unambiguous tag mapping to gene (sense and antisense) 10016 26.10 11259 29.33 10441 27.20