From: Colorectal cancer DNA methylation patterns from patients in Manaus, Brazil
Primer pair | Methylated set (5′–3′) upstream/downstream | Unmethylated set (5′–3′) upstream/downstream | References |
---|---|---|---|
TIMP2 | 5′-AATAAAATTGCGGTTCGGTTTAAGTTC-3′ 5′-CTCTCCTCTTTATCTCGAAAACGCG-3′ | 5′-GTAATAAAATTGTGGTTTGGTTTAAGTTT-3′ 5′-TTCTCTCCTCTTTATCTCAAAAACACA-3′ | [38] |
CDKN2A | 5′-TTATTAGAGGGTGGGGCGGATCGC-3′ 5′- GACCCCGAACCGCGACCGTAA -3′ | 5′-TTATTAGAGGGTGGGGTGGATTGT-3′ 5′CAACCCCAAACCACAACCATAA-3′ | [37] |
DAPK | 5′-GGATAGTCGGATCGAGTTAACGTC-3′ 5′-CCCTCCCAAACGCCGA-3′ | 5′-GGAGGATAGTTGGATTGAGTTAATGTT-3′ 5′-CAAATCCCTCCCAAACACCAA-3′ | [35] |
CDH1 | 5′- GTGAATTTTTAGTTAATTAGCGGTAC-3′ 5′-CATAACTAACCGAAAACGCCG-3′ | 5′- GTAGGTGAATTTTTAGTTAATTAGTGGTA3′ 5′-ACCCATAACTAACCAAAAACACCA-3′ | [36] |